Melissa - Smallwood-2014 data analysis

Andreas C. Kapourani1* and Guido Sanguinetti1**

1School of Informatics, University of Edinburgh, UK

*c.a.kapourani or kapouranis.andreas@gmail.com
**G.Sanguinetti@ed.ac.uk

1 AUC performance

For visualisation purposes, we add a small jitter (Gaussian noise) on the output plots so the boxplot colours are clear. This does not change the overall trend and performance of each method.

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2 F1 performance

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3 TPR / FPR performance

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4 Precision / Recall performance

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5 Example of clustered methylation profiles - promoters

## [1] 2401

6 Example of clustered methylation profiles - enhancers

## Filtering low covered regions across cells...

## [1] 2155

7 Final plot

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8 Example of developmental promoters

## [1] 4234

9 Pluripotency plot

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